PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ote100038450001
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
Family Dof
Protein Properties Length: 97aa    MW: 10581 Da    PI: 8.8999
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ote100038450001genomeOteDB-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof50.25.4e-166997230
                        zf-Dof  2 kekalkcprCdstntkfCyynnyslsqPr 30
                                  ++++lkcprC+stntkfCy+nnyslsqPr
  Ote100038450001|100038450001 69 PDSSLKCPRCESTNTKFCYFNNYSLSQPR 97
                                  57889***********************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
ProDomPD0074789.0E-185397IPR003851Zinc finger, Dof-type
PfamPF027014.1E-137197IPR003851Zinc finger, Dof-type
PROSITE profilePS5088415.0637397IPR003851Zinc finger, Dof-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 97 aa     Download sequence    Send to blast
MVFSSLPPYL DPSNWHQQQN HHIIGSSAAN HLLPPTPPQA AVAAAPPPPG SIRPGSMSER  60
ARVANIPMPD SSLKCPRCES TNTKFCYFNN YSLSQPR
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00295DAPTransfer from AT2G37590Download
Motif logo
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011077462.15e-39PREDICTED: LOW QUALITY PROTEIN: dof zinc finger protein DOF5.1-like
SwissprotO809282e-27DOF24_ARATH; Dof zinc finger protein DOF2.4
TrEMBLA0A061H0308e-35A0A061H030_THECC; OBF-binding protein 3, putative isoform 1
STRINGVIT_08s0007g00180.t018e-33(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA19172463